Publications from 2024 | LiSyM Cancer

Published Date

2024-12-21

Badia-i-Mompel P, Casals-Franch R, Wessels L, et al

Pau Badia-i-Mompel
Roger Casals-Franch
Lorna Wessels
Sophia Müller-Dott
Rémi Trimbour
Yunxiao Yang
Ricardo O. Ramirez Flores
Julio Saez-Rodriguez

Journal

preprint

Published Date

2024-12-16

Angendohr C, Missing L, Ehlting C, et al

Carolin Angendohr
Leah Missing
Christian Ehlting
Stephanie D. Wolf
Karl S. Lang
Mihael Vucur
Tom Luedde
Johannes G. Bode

Journal

PLOS ONE

Published Date

2024-11-19

Lussana A, Müller-Dott S, Saez-Rodriguez J, Petsalaki E

Alessandro Lussana
Sophia Müller-Dott
Julio Saez-Rodriguez
Evangelia Petsalaki

Journal

Bioinformatics

Published Date

2024-11-05

Dropmann A, Alex S, Schorn K, et al

A. Dropmann
S. Alex
K. Schorn
C. Tong
T. Caccamo
P. Godoy
I. Ilkavets
R. Liebe
D. Gonzalez
J. G. Hengstler
A. Piiper
L. Quagliata
M. S. Matter
O. Waidmann
F. Finkelmeier
T. Feng
T. S. Weiss
N. Rahbari
E. Birgin
E. Rasbach
S. Roessler
K. Breuhahn
M. Toth
M. P. Ebert
S. Dooley
S. Hammad
N. M. Meindl-Beinker

Journal

Biochem Biophys Res Commun

Published Date

2024-10-22

Gu W, de Lédinghen V, Aubé C, et al

W. Gu
V. de Ledinghen
C. Aube
A. Krag
C. Strassburg
L. Castera
J. Dumortier
M. Friedrich-Rust
S. Pol
I. Grgurevic
Y. Zeleke
M. Praktiknjo
R. Schierwagen
S. Klein
S. Francque
H. Gottfriedova
I. Sporea
P. Schindler
F. Rennebaum
M. J. Brol
M. Schulz
F. E. Uschner
J. Fischer
C. Margini
W. Wang
A. Delamarre
J. Best
A. Canbay
D. J. M. Bauer
B. Simbrunner
G. Semmler
T. Reiberger
J. Boursier
D. N. Rasmussen
V. Vilgrain
A. Guibal
S. Zeuzem
C. Vassord
L. Vonghia
R. Senkerikova
A. Popescu
A. Berzigotti
W. Laleman
M. Thiele
C. Jansen
J. Trebicka

Journal

NEJM Evid

Published Date

2024-10-18

Kulow VA, Roegner K, Labes R, et al

Vera A. Kulow
Kameliya Roegner
Robert Labes
Mumtaz Kasim
Susanne Mathia
Claudia S. Czopek
Nikolaus Berndt
Philipp N. Becker
Gohar Ter‐Avetisyan
Friedrich C. Luft
Philipp Enghard
Christian Hinze
Jan Klocke
Kai‐Uwe Eckardt
Kai M. Schmidt‐Ott
Pontus B. Persson
Christian Rosenberger
Michael Fähling

Journal

Acta Physiologica

Published Date

2024-10-01

Guo J, Krehl K, Safraou Y, et al

Jing Guo
Karolina Krehl
Yasmine Safraou
Iwona Wallach
Jürgen Braun
David Meierhofer
Ingolf Sack
Nikolaus Berndt

Journal

Heliyon

Published Date

2024-09-29

González D, Campos G, Pütter L, et al

Daniela González
Gisela Campos
Larissa Pütter
Adrian Friebel
Christian H. Holland
Leonhard Holländer
Ahmed Ghallab
Zaynab Hobloss
Maiju Myllys
Stefan Hoehme
Nadja M. Meindl-Beinker
Steven Dooley
Rosemarie Marchan
Thomas S. Weiss
Jan G. Hengstler
Patricio Godoy

Journal

Cells

Published Date

2024-09-11

Elurbide J, Colyn L, Latasa MU, et al

Jasmin Elurbide
Leticia Colyn
Maria U Latasa
Iker Uriarte
Stefano Mariani
Amaya Lopez-Pascual
Emiliana Valbuena
Borja Castello-Uribe
Robert Arnes-Benito
Elena Adan-Villaescusa
Luz A Martinez-Perez
Mikel Azkargorta
Felix Elortza
Hanghang Wu
Marcin Krawczyk
Kai Markus Schneider
Bruno Sangro
Luca Aldrighetti
Francesca Ratti
Andrea Casadei Gardini
Jose J G Marin
Irene Amat
Jesus M Urman
Maria Arechederra
Maria Luz Martinez-Chantar
Christian Trautwein
Meritxell Huch
Francisco Javier Cubero
Carmen Berasain
Maite G Fernandez-Barrena
Matias A Avila

Journal

Gut

Published Date

2024-09-09

Zheng C, Li X, Lyu H, et al

C. Zheng
Xiaojia Li
H. Lyu
C. Chen
J. Mueller
A. Dropmann
S. Hammad
S. Dooley
S. He
S. Mueller

Journal

Hepat Med

Published Date

2024-08-01

Wang S, Link F, Munker S, et al

S. Wang
F. Link
S. Munker
W. Wang
R. Feng
R. Liebe
Y. Li
Y. Yao
H. Liu
C. Shao
M. P. A. Ebert
H. Ding
S. Dooley
H. L. Weng
S. S. Wang

Journal

Hepatol Commun

Published Date

2024-07-13

Schmithals C, Kakoschky B, Denk D, et al

C. Schmithals
B. Kakoschky
D. Denk
M. von Harten
J. H. Klug
E. Hintermann
A. Dropmann
E. Hamza
A. C. Jacomin
J. U. Marquardt
S. Zeuzem
P. Schirmacher
E. Herrmann
U. Christen
T. J. Vogl
O. Waidmann
S. Dooley
F. Finkelmeier
A. Piiper

Journal

EBioMedicine

Published Date

2024-07-02

Müller-Dott S, Jaehnig EJ, Munchic KP, et al

Sophia Müller-Dott
Eric J. Jaehnig
Khoi Pham Munchic
Wen Jiang
Tomer M. Yaron-Barir
Sara R. Savage
Martin Garrido-Rodriguez
Jared L. Johnson
Alessandro Lussana
Evangelia Petsalaki
Jonathan T. Lei
Aurélien Dugourd
Karsten Krug
Lewis C. Cantley
D. R. Mani
Bing Zhang
Julio Saez-Rodriguez

Journal

bioRxiv

Published Date

2024-05-04

Blank V, Karlas T, Anderegg U, et al

Valentin Blank
Thomas Karlas
Ulf Anderegg
Johannes Wiegand
Josi Arnold
Linnaeus Bundalian
Gabriela‐Diana Le Duc
Christiane Körner
Thomas Ebert
Anja Saalbach

Journal

Liver International

Published Date

2024-03-01

Jung YS, Radhakrishnan K, Hammad S, et al

Yoon Seok Jung
Kamalakannan Radhakrishnan
Seddik Hammad
Sebastian Müller
Johannes Müller
Jung-Ran Noh
Jina kim
In-Kyu Lee
Sung Jin Cho
Don-Kyu Kim
Yong-Hoon Kim
Chul-Ho Lee
Steven Dooley
Hueng-Sik Choi

Journal

Redox Biology

Published Date

2024-02-21

Helm B, Hansen P, Lai L, et al

Barbara Helm
Pauline Hansen
Li Lai
Luisa Schwarzmüller
Simone M. Clas
Annika Richter
Max Ruwolt
Fan Liu
Dario Frey
Lorenza A. D’Alessandro
Wolf-Dieter Lehmann
Marcel Schilling
Dominic Helm
Dorothea Fiedler
Ursula Klingmüller

Journal

bioRxiv

Published Date

2024-02-16

Zhao J, Ghallab A, Hassan R, Dooley S, Hengstler JG, Drasdo D

J. Zhao
A. Ghallab
R. Hassan
S. Dooley
J. G. Hengstler
D. Drasdo

Journal

iScience

Published Date

2024-01-25

Peng X, Janićijević Ž, Lemm S, et al

Xuan Peng
Željko Janićijević
Sandy Lemm
Sandra Hauser
Michael Knobel
Jens Pietzsch
Michael Bachmann
Larysa Baraban

Journal

Advanced Healthcare Materials

Published Date

2024-01-12

Burbano de Lara S, Kemmer S, Biermayer I, et al

Sebastian Burbano de Lara
Svenja Kemmer
Ina Biermayer
Svenja Feiler
Artyom Vlasov
Lorenza A D’Alessandro
Barbara Helm
Christina Mölders
Yannik Dieter
Ahmed Ghallab
Jan G Hengstler
Christiane Körner
Madlen Matz-Soja
Christina Götz
Georg Damm
Katrin Hoffmann
Daniel Seehofer
Thomas Berg
Marcel Schilling
Jens Timmer
Ursula Klingmüller

Journal

Molecular Systems Biology

Published Date

2024-01-01

Feng R, Tong C, Lin T, et al

Rilu Feng
Chenhao Tong
Tao Lin
Hui Liu
Chen Shao
Yujia Li
Carsten Sticht
Kejia Kan
Xiaofeng Li
Rui Liu
Sai Wang
Shanshan Wang
Stefan Munker
Hanno Niess
Christoph Meyer
Roman Liebe
Matthias P. Ebert
Steven Dooley
Hua Wang
Huiguo Ding
Hong-Lei Weng

Journal

The American Journal of Pathology

Published Date

2024-01-01

Wang S, Link F, Han M, et al

Sai Wang
Frederik Link
Mei Han
Roohi Chaudhary
Anastasia Asimakopoulos
Roman Liebe
Ye Yao
Seddik Hammad
Anne Dropmann
Marinela Krizanac
Claudia Rubie
Laura Kim Feiner
Matthias Glanemann
Matthias P.A. Ebert
Ralf Weiskirchen
Yoav I. Henis
Marcelo Ehrlich
Steven Dooley

Journal

Cellular and Molecular Gastroenterology and Hepatology

Publications

Comparison and evaluation of methods to infer gene regulatory networks from multimodal single-cell data

Interleukin 1 β suppresses bile acid-induced BSEP expression via a CXCR2-dependent feedback mechanism

PhosX: data-driven kinase activity inference from phosphoproteomics experiments

The TGF-beta1 target WISP1 is highly expressed in liver cirrhosis and cirrhotic HCC microenvironment and involved in pro- and anti-tumorigenic effects.

Hepatocellular Cancer Surveillance in Patients with Advanced Chronic Liver Disease.

Beyond hemoglobin: Critical role of 2,3‐bisphosphoglycerate mutase in kidney function and injury

Pregnancy alters fatty acid metabolism, glucose regulation, and detoxification of the liver in synchrony with biomechanical property changes

Role of WISP1 in Stellate Cell Migration and Liver Fibrosis

Identification of PRMT5 as a therapeutic target in cholangiocarcinoma

Direct Ingestion of Oxidized Red Blood Cells (Efferocytosis) by Hepatocytes.

Retinoic acid generates a beneficial microenvironment for liver progenitor cell activation in acute liver failure.

Tumour-specific activation of a tumour-blood transport improves the diagnostic accuracy of blood tumour markers in mice.

Comprehensive evaluation of phosphoproteomic-based kinase activity inference (preprint)

Thy‐1 restricts steatosis and liver fibrosis in steatotic liver disease

ERRγ-inducible FGF23 promotes alcoholic liver injury through enhancing CYP2E1 mediated hepatic oxidative stress

Lysis buffer selection guidance for mass spectrometry-based global proteomics including studies on the intersection of signal transduction and metabolism (preprint)

A liver digital twin for in silico testing of cellular and inter-cellular mechanisms in regeneration after drug-induced damage.

Impact of Viscosity on Human Hepatoma Spheroids in Soft Core–Shell Microcapsules

Basal MET phosphorylation is an indicator of hepatocyte dysregulation in liver disease

Insulin Determines Transforming Growth Factor β Effects on Hepatocyte Nuclear Factor 4α Transcription in Hepatocytes

The Interplay of TGF-β1 and Cholesterol Orchestrating Hepatocyte Cell Fate, EMT, and Signals for HSC Activation